Regulatory T Cell Function And Therapeutics

One of our areas of focus is investigating the programs underlying the suppressive functions of regulatory T cells (Tregs) to understand their roles, both beneficial and detrimental, in mediating immune homeostasis, protecting against autoimmunity, and preventing immune elimination of cancer cells.
Regulatory T Cell Function And Therapeutics

Regulatory T cells are critical for protection against autoimmune and inflammatory diseases and are under development at UCSF as cellular therapies to treat a wide range of diseases. The genetic underpinnings of Treg identity have been a long-standing area of focus for our work. Recently, the lab has made significant strides to discover genes critical for Treg cell identity and function via CRISPR screening in primary mouse Tregs. We identified novel regulators of FOXP3, including ubiquitin-specific peptidase 22 (USP22), whose modulation in Tregs affects autoimmunity and cancer immunity in mice.

We have also extended CRISPR-based functional genomics to human Treg cells, generating >50,000 single-cell transcriptomes from Tregs subjected to targeted genetic perturbations, revealing uncharacterized transcriptional regulators and downstream gene networks. These studies identify pathways critical for Tregs and demonstrate a broadly applicable functional genomic strategy to discover new targets for Treg immunotherapies.

Selected Publications

Functional CRISPR dissection of gene networks controlling human regulatory T cell identity
Nature Immunology, 2020
CRISPR screen in regulatory T cells reveals modulators of Foxp3
Nature, 2020
A Mutation in the Transcription Factor Foxp3 Drives T Helper 2 Effector Function in Regulatory T Cells
Immunity, 2019
Foxp3 occupancy and regulation of key target genes during T-cell stimulation
Nature, 2007


Media highlights of Alex and the lab’s research.
Genetic Network that Differentiates Regulatory T Cells Mapped
Scientists map genes controlling immune system “brakes”